Design and development of a comprehensive data management platform for cytomics: cytomicsDB

Leiden Repository

Design and development of a comprehensive data management platform for cytomics: cytomicsDB

Type: Doctoral Thesis
Title: Design and development of a comprehensive data management platform for cytomics: cytomicsDB
Author: Larios Vargas, Enrique
Publisher: Leiden Institute of Advanced Computer Science (LIACS), Faculty of Science, Leiden University
Issue Date: 2015-11-25
Keywords: Cytomics
BioInformatics
HTS Workflow
High-throughput screening experiments
Abstract: In Cytomics environment, scientist has to continuosly deal with a large volume of structured and unstructured data, this condition in particular, makes a challenge the interoperability for any platform developed for cytomics. CytomicsDB approach is an effort for developing a framework which takes care of the standardization of the unstructured data, providing a common data model layer for HTS experiments. This model as well is suitable for the integration with other systems in Cytomics, in special other repositories, which allow the validation of key metadata used in the experiments, thus ensure reliability of the data stored. Other possible solutions for cytomics data management, should take special care in the use of data model standards for enhancing the collaboration and data sharing in the scientific community.
Description: promotor: J.N. Kok, Co-promotor: F.J. Verbeek
With summary in Dutch
Faculty: Faculteit der Wiskunde en Natuurwetenschappen
Citation: Larios Vargas, E., 2015, Doctoral Thesis, Leiden University
ISBN: 9789462599505
Sponsor: BAPE Erasmus Mundus Program
Handle: http://hdl.handle.net/1887/36426
 

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application/pdf Chapter 1 Introduction 11.79Mb View/Open
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application/pdf Bibliography 195.7Kb View/Open
application/pdf Summary 141.5Kb View/Open
application/pdf Summary in Dutch 143.9Kb View/Open
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